Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920956.1_cds_XP_016470016.1_62508
CDS Infomation

[gene=LOC107792320] [db_xref=GeneID:107792320] [protein=DUF21 domain-containing protein At4g14240-like] [protein_id=XP_016470016.1] [location=join(106806..107040,108434..108510,109242..109325,109418..109531,110537..110620,110737..110808,111095..111162,112104..112191,112282..112355,112440..112803,112900..112946,113031..113151)] [gbkey=CDS]
Sequence

ATGCACTTGTTGAATGCAGTGGAAATAGCTAGAATGGCTACAAGGGTACCAAATTCGTTA
GGGGCAGAAATAGAATTTGGGACAGTAACATGGTTTGTGTATGCAGGGATCTCATGTTTC
TTGGTACTATTTGCTGGAATTATGTCGGGTTTAACATTGGGTCTTATGTCTTTGGGTCTT
GTTGAGCTTGAGATCCTTCAACGTAGTGGCACCCAAGTTGAGAAAAAGCAAGCAGCTACA
ATATTTCCTGTAGTTCAGAAGCAACACCAGCTTCTTGTGACCCTACTTCTATGTAATGCT
GCTTCGATGGAGGCACTACCTATATACCTGGACAAAATTTTCAACCAATATGTGGCCATT
ATACTATCAGTAACTTTTGTTTTGGCATTTGGAGAGGTTATTCCTCAAGCAATATGCACC
AGATATGGACTTGCCGTAGGCGCAAACTTTGTCTGGCTTGTTCGTATTCTGATGATTCTA
TGCTACCCAATTGCTTACCCCATAGGAAAGATCCTGGACTGCGTATTGGGACACAATGAA
GTACTATTCAGACGTGCTCAGCTGAAAGCCCTTGTTTCTATTCACGGTCAAGAGGCTGGC
AAGGGAGGTGAACTTACACATGATGAGACGACAATCATTAGTGGAGCACTAGATTTGACT
GAGAAGACTGCTGAGGAGGCAATGACGCCCATTGAGTCAACATTTTCATTGGATGTCAAT
TCAAAGCTGGACTGGGAAGCAATGGGAAAAGTTCTTGCTAGGGGTCATAGCAGAGTTCCT
GTATACTCTGGCAATCCAAAGAATATTATTGGTCTTCTACTGGTGAAAAGTCTTCTTACT
GTGCGGCCGGAAACAGAGACGCCAGTTAGTTCTGTTTCTATTCGGAGAATTCCACGAGTT
CCTGCTGATATGCCGTTGTATGACATACTAAACGAGTTCCAAAAGGGTAGCAGTCATATG
GCTGCAGTAGTGAAGACTAAAGGAAAAAGCAAAAAACATCCTTTGGTCATCGAGGAAGAG
AAATCTCAGGATGGTGCAGTCACTGGTGGAAATTCTCTGTTAACTACTTCTCAAACAAAG
GATAAAAAGTCAGATAGCGTTGTCGTTGATATTGAGAAGGTTAGAGTCCCAGCAGCAGTA
ACCTCGCCTGCATCTGGTGATGCAGTGATGGATTCATTGATTCAGTCATCAGACGATATT
GAGGAAGGTGAAGTAATAGGTATAATCACCTTGGAAGATGTATTTGAAGAACTTTTACAG
GAGGAAATAGTAGATGAGACCGATGAGTATGTTGATGTACATAGAAGGATACGTGTGGCT
GCTGCAGCAGCTGCTTCATCAGTGGCACGAGCTCCATCGGTTCGTAGATTAACAGCCCAA
AAGGCAGCTGTAAGTGCACATGCATTTTATATGATGAAATTTTCTTGA

Peptide Sequence

PEP ID

XP_016470016.1
PEP Infomation

PREDICTED: DUF21 domain-containing protein At4g14240-like [Nicotiana tabacum]
Sequence

MHLLNAVEIARMATRVPNSLGAEIEFGTVTWFVYAGISCFLVLFAGIMSGLTLGLMSLGL
VELEILQRSGTQVEKKQAATIFPVVQKQHQLLVTLLLCNAASMEALPIYLDKIFNQYVAI
ILSVTFVLAFGEVIPQAICTRYGLAVGANFVWLVRILMILCYPIAYPIGKILDCVLGHNE
VLFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVN
SKLDWEAMGKVLARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSSVSIRRIPRV
PADMPLYDILNEFQKGSSHMAAVVKTKGKSKKHPLVIEEEKSQDGAVTGGNSLLTTSQTK
DKKSDSVVVDIEKVRVPAAVTSPASGDAVMDSLIQSSDDIEEGEVIGIITLEDVFEELLQ
EEIVDETDEYVDVHRRIRVAAAAAASSVARAPSVRRLTAQKAAVSAHAFYMMKFS

Transcript Sequence

Gene sequence data has not been registered.